--- title: "Introduction to rtaxref" output: rmarkdown::html_vignette vignette: > %\VignetteIndexEntry{rtaxref} %\VignetteEngine{knitr::rmarkdown} %\VignetteEncoding{UTF-8} --- ```{r, include = FALSE} knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) ``` ```{r setup} library(rtaxref) ``` rtaxref queries [the API](https://taxref.mnhn.fr/taxref-web/api/doc) of [the French Taxonomic Referential (TAXREF)](https://inpn.mnhn.fr/programme/referentiel-taxonomique-taxref). This referential contains much taxonomical information as well as many other kinds of information (occurrence in French territories, conservation statuses, etc.). ## Searching for a taxon name TODO explain `rt_taxa_search()`. Talk about importance of id of species (CD_NOM). Refer to the documentation of function to get lists of values of potential arguments. Querying a specific version of TAXREF. ## Retrieving the status of species ## Additional info Vernacular names, history of taxon in TAXREF, uses ## Getting interaction data ## Linking this information to other databases externals ids and related databases.