{ "_id": "6a1e99cd1d7bb097a0a6e10a", "Package": "fundiversity", "Title": "Easy Computation of Functional Diversity Indices", "Version": "1.1.1.9000", "Authors@R": "c(\nperson(\"Matthias\", \"Grenié\",\nemail = \"matthias.grenie@gmail.com\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-4659-7522\")),\nperson(\"Hugo\", \"Gruson\",\nrole = \"aut\",\ncomment = c(ORCID = \"0000-0002-4094-1476\"))\n)", "Description": "Computes six functional diversity indices. These are\nnamely, Functional Divergence (FDiv), Function Evenness (FEve),\nFunctional Richness (FRic), Functional Richness intersections\n(FRic_intersect), Functional Dispersion (FDis), and Rao's\nentropy (Q) (reviewed in Villéger et al. 2008\n). Provides efficient, modular, and\nparallel functions to compute functional diversity indices\n(Grenié & Gruson 2023 ).", "License": "GPL-3", "Language": "en", "Encoding": "UTF-8", "LazyData": "true", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.2", "URL": "https://funecology.github.io/fundiversity/,\nhttps://github.com/funecology/fundiversity", "BugReports": "https://github.com/funecology/fundiversity/issues", "Config/testthat/edition": "3", "VignetteBuilder": "knitr", "Repository": "https://rekyt.r-universe.dev", "Date/Publication": "2026-03-30 07:04:42 UTC", "RemoteUrl": "https://github.com/funecology/fundiversity", "RemoteRef": "HEAD", "RemoteSha": "0a65df73e296fd24d2987654a4c7dfd82596be91", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-02 08:49:04 UTC", "User": "root" }, "Author": "Matthias Grenié [aut, cre] (ORCID:\n),\nHugo Gruson [aut] (ORCID: )", "Maintainer": "Matthias Grenié ", "MD5sum": "5f373f51c60e7129efa06f43720932a0", "_user": "rekyt", "_type": "src", "_file": "fundiversity_1.1.1.9000.tar.gz", "_fileid": "284434c7fe028df644d3d21cdc9d5adfa6b44599a79882157e61d90ff48a2e6b", "_filesize": 940594, "_sha256": "284434c7fe028df644d3d21cdc9d5adfa6b44599a79882157e61d90ff48a2e6b", "_created": "2026-06-02T08:49:04.000Z", "_published": "2026-06-02T08:52:29.956Z", "_distro": "noble", "_jobs": [ { "job": 79033820597, "time": 155, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7353184951" }, { "job": 79033820660, "time": 143, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7353180817" }, { "job": 79033820763, "time": 136, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7353177404" }, { "job": 79033820553, "time": 108, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7353167584" }, { "job": 79033269670, "time": 189, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7353125634" }, { "job": 79033820554, "time": 106, "config": 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"Bolborhynchus_orbygnesius", "Brotogeris_cyanoptera", "Brotogeris_sanctithomae", "Buthraupis_montana", "Cacicus_cela", "Cacicus_chrysonotus", "Cacicus_haemorrhous", "Capito_auratus", "Catamblyrhynchus_diadema", "Catharus_fuscater", "Catharus_ustulatus", "Celeus_elegans", "Celeus_flavus", "Celeus_grammicus", "Celeus_spectabilis", "Celeus_torquatus", "Cephalopterus_ornatus", "Chiroxiphia_boliviana", "Chiroxiphia_pareola", "Chlorochrysa_calliparaea", "Chlorophanes_spiza", "Chlorophonia_cyanea", "Chlorornis_riefferii", "Chlorospingus_canigularis", "Chlorospingus_flavigularis", "Chlorospingus_ophthalmicus", "Chlorospingus_parvirostris", "Claravis_mondetoura", "Colaptes_rubiginosus", "Conioptilon_mcilhennyi", "Conirostrum_cinereum", "Conirostrum_speciosum", "Cotinga_cayana", "Cotinga_maynana", "Cyanerpes_caeruleus", "Cyanerpes_cyaneus", "Cyanocompsa_cyanoides", "Cyanocorax_cyanomelas", "Cyanocorax_violaceus", "Cyanocorax_yncas", "Dacnis_albiventris", "Dacnis_cayana", "Dacnis_flaviventer", "Dacnis_lineata", "Delothraupis_castaneoventris", "Diglossa_brunneiventris", "Diglossa_caerulescens", "Diglossa_cyanea", "Diglossa_glauca", "Diglossa_mystacalis", "Diglossa_sittoides", "Dubusia_taeniata", "Elaenia_albiceps", "Elaenia_flavogaster", "Elaenia_gigas", "Elaenia_obscura", "Elaenia_pallatangae", "Elaenia_parvirostris", "Elaenia_spectabilis", "Elaenia_strepera", "Entomodestes_leucotis", "Eubucco_richardsoni", "Eubucco_tucinkae", "Eubucco_versicolor", "Euphonia_chlorotica", "Euphonia_chrysopasta", "Euphonia_laniirostris", "Euphonia_mesochrysa", "Euphonia_minuta", "Euphonia_rufiventris", "Euphonia_xanthogaster", "Geotrygon_montana", "Gymnoderus_foetidus", "Icterus_icterus", "Iodopleura_isabellae", "Iridosornis_analis", "Iridosornis_jelskii", "Lamprospiza_melanoleuca", "Laniisoma_elegans", "Laniocera_hypopyrra", "Lepidothrix_coeruleocapilla", "Lepidothrix_coronata", "Lipaugus_vociferans", "Lophotriccus_pileatus", "Machaeropterus_pyrocephalus", "Manacus_manacus", "Mionectes_macconnelli", "Mionectes_oleagineus", "Mionectes_olivaceus", "Mionectes_striaticollis", "Myadestes_ralloides", "Nannopsittaca_dachilleae", "Neopelma_sulphureiventer", "Ortalis_guttata", "Oxyruncus_cristatus", "Patagioenas_cayennensis", "Patagioenas_fasciata", "Patagioenas_plumbea", "Patagioenas_subvinacea", "Penelope_jacquacu", "Penelope_montagnii", "Pharomachrus_antisianus", "Pharomachrus_auriceps", "Pharomachrus_pavoninus", "Pheucticus_aureoventris", "Pheucticus_chrysogaster", "Pionites_leucogaster", "Pionus_menstruus", "Pionus_tumultuosus", "Pipile_cumanensis", "Pipra_chloromeros", "Pipra_fasciicauda", "Pipraeidea_melanonota", "Pipreola_arcuata", "Pipreola_frontalis", "Pipreola_intermedia", "Piranga_leucoptera", "Piranga_rubra", "Porphyrolaema_porphyrolaema", "Primolius_couloni", "Psarocolius_angustifrons", "Psarocolius_atrovirens", "Psarocolius_bifasciatus", "Psarocolius_decumanus", "Pteroglossus_azara", "Pteroglossus_beauharnaesii", "Pteroglossus_castanotis", "Pteroglossus_inscriptus", "Pyrilia_barrabandi", "Pyrrhura_roseifrons", "Pyrrhura_rupicola", "Querula_purpurata", "Ramphastos_tucanus", "Ramphastos_vitellinus", "Ramphocelus_carbo", "Ramphocelus_nigrogularis", "Saltator_aurantiirostris", "Saltator_coerulescens", "Saltator_grossus", "Saltator_maximus", "Schistochlamys_melanopis", "Selenidera_reinwardtii", "Snowornis_subalaris", "Steatornis_caripensis", "Tachyphonus_cristatus", "Tachyphonus_rufiventer", "Tangara_arthus", "Tangara_callophrys", "Tangara_chilensis", "Tangara_chrysotis", "Tangara_cyanicollis", "Tangara_cyanotis", "Tangara_gyrola", "Tangara_mexicana", "Tangara_nigrocincta", "Tangara_nigroviridis", "Tangara_parzudakii", "Tangara_punctata", "Tangara_ruficervix", "Tangara_schrankii", "Tangara_vassorii", "Tangara_velia", "Tangara_viridicollis", "Tangara_xanthocephala", "Tangara_xanthogastra", "Tersina_viridis", "Thlypopsis_sordida", "Thraupis_bonariensis", "Thraupis_cyanocephala", "Thraupis_episcopus", "Thraupis_palmarum", "Tityra_cayana", "Tityra_inquisitor", "Tityra_semifasciata", "Touit_huetii", "Trichothraupis_melanops", "Trogon_collaris", "Trogon_curucui", "Trogon_melanurus", "Trogon_personatus", "Trogon_violaceus", "Trogon_viridis", "Turdus_albicollis", "Turdus_amaurochalinus", "Turdus_chiguanco", "Turdus_fuscater", "Turdus_hauxwelli", "Turdus_ignobilis", "Turdus_leucops", "Turdus_nigriceps", "Turdus_serranus", "Tyrannus_savana", "Tyrannus_tyrannus", "Xenopipo_holochlora", "Xenopipo_unicolor", "Zimmerius_bolivianus", "Zimmerius_gracilipes" ], "rows": 8, "table": true, "tojson": true }, { "name": "site_sp_plants", "title": "Site-species matrix of plants along a Tropical Gradient", "object": "site_sp_plants", "class": [ "matrix", "array" ], "fields": [ "Abuta_grandifolia", "Alchornea_latifolia", "Alchornea_triplinervia", "Allophylus_punctatus", "Alnus_acuminata", "Aniba_guianensis", "Anthurium_croatii", "Anthurium_obtusum", "Ardisia_guianensis", "Ardisia_loretensis", "Bactris_hirta", "Banara_arguta", "Bejaria_aestuans", "Besleria_compta", "Bocconia_integrifolia", "Bomarea_edulis", "Brachyotum_grisebachii", "Brachyotum_weberbaueri", "Brosimum_utile", "Brunellia_stenoptera", "Cabralea_canjerana", "Calatola_costaricensis", "Calyptranthes_ruiziana", "Calyptranthes_speciosa", "Caryocar_amygdaliforme", "Caryocar_glabrum", "Casearia_combaymensis", "Casearia_corymbosa", "Casearia_obovalis", "Casearia_ulmifolia", "Cavendishia_bracteata", "Cayaponia_citrullifolia", "Cecropia_angustifolia", "Cecropia_polystachya", "Cecropia_strigosa", "Celtis_iguanaea", "Cestrum_parqui", "Cestrum_reflexum", "Chamaedorea_pauciflora", "Chamaedorea_pinnatifrons", "Chrysochlamys_ulei", "Chrysochlamys_weberbaueri", "Chrysophyllum_argenteum", "Chrysophyllum_ulei", "Cissus_alata", "Clavija_elliptica", "Clethra_revoluta", "Clidemia_capitellata", "Clidemia_dentata", "Clidemia_dimorphica", "Clidemia_hirta", "Clidemia_septuplinervia", "Clusia_alata", "Clusia_elliptica", "Clusia_flavida", "Clusia_hammeliana", "Clusia_trochiformis", "Coccocypselum_hirsutum", "Collaea_speciosa", "Conceveiba_terminalis", "Condaminea_corymbosa", "Conostegia_inusitata", "Cordia_nodosa", "Croton_pachypodus", "Croton_rusbyi", "Cybianthus_venezuelanus", "Demosthenesia_mandonii", "Dendropanax_cuneatus", "Dendrophthora_chrysostachya", "Dendrophthora_densifolia", "Dendrophthora_paucifolia", "Desfontainia_spinosa", "Diogenesia_vargasiana", "Dioicodendron_dioicum", "Disterigma_alaternoides", "Disterigma_ovatum", "Elaeagia_mariae", "Euterpe_precatoria", "Faramea_capillipes", "Faramea_flavicans", "Faramea_glandulosa", "Faramea_multiflora", "Faramea_uniflora", "Ficus_americana", "Ficus_coerulescens", "Ficus_paraensis", "Ficus_piresiana", "Ficus_trigona", "Freziera_angulosa", "Freziera_karsteniana", "Freziera_parva", "Freziera_reticulata", "Gaultheria_bracteata", "Gaultheria_buxifolia", "Gaultheria_erecta", "Gaultheria_glomerata", "Gaultheria_reticulata", "Geonoma_brongniartii", "Geonoma_macrostachys", "Geonoma_maxima", "Geonoma_stricta", "Graffenrieda_cucullata", "Graffenrieda_emarginata", "Guarea_kunthiana", "Guarea_macrophylla", "Guarea_pterorhachis", "Guatteria_brevicuspis", "Guatteria_duodecima", "Guatteria_guentheri", "Guatteria_terminalis", "Guatteria_trichocarpa", "Guatteria_ucayalina", "Guettarda_crispiflora", "Gurania_bignoniacea", "Gymnosporia_magnifolia", "Hasseltia_floribunda", "Hedyosmum_angustifolium", "Hedyosmum_cuatrecazanum", "Hedyosmum_goudotianum", "Hedyosmum_scabrum", "Hedyosmum_sprucei", "Hedyosmum_tepuiense", "Hedyosmum_translucidum", "Heisteria_acuminata", "Heliconia_subulata", "Helicostylis_elegans", "Helicostylis_scabra", "Helicostylis_tomentosa", "Helicostylis_tovarensis", "Hesperomeles_ferruginea", "Hesperomeles_obtusifolia", "Hevea_guianensis", "Hieronyma_moritziana", "Hieronyma_oblonga", "Hiraea_fagifolia", "Homalium_guianense", "Hydrangea_jelskii", "Ilex_nervosa", "Ilex_villosula", "Inga_acreana", "Inga_punctata", "Iriartea_deltoidea", "Iryanthera_hostmannii", "Isertia_laevis", "Jacaratia_digitata", "Ladenbergia_oblongifolia", "Leandra_secunda", "Leonia_crassa", "Licania_micrantha", "Ligaria_cuneifolia", "Lunania_parviflora", "Lycianthes_amatitlanensis", "Maieta_guianensis", "Maieta_poeppigii", "Malanea_sarmentosa", "Marcgravia_crenata", "Marcgraviastrum_macrocarpum", "Margaritopsis_cephalantha", "Margaritopsis_huallagae", "Matisia_ochrocalyx", "Mayna_odorata", "Maytenus_verticillata", "Meliosma_frondosa", "Meliosma_peytonii", "Mendoncia_aspera", "Meriania_tomentosa", "Miconia_adrieni", "Miconia_affinis", "Miconia_aggregata", "Miconia_alpina", "Miconia_amplexicaulis", "Miconia_aprica", "Miconia_asperrima", "Miconia_barbeyana", "Miconia_caerulea", "Miconia_calvescens", "Miconia_carpishana", "Miconia_centrodesma", "Miconia_cuneata", "Miconia_cyanocarpa", "Miconia_denticulata", "Miconia_egensis", "Miconia_elaeagnoides", "Miconia_elongata", "Miconia_emendata", "Miconia_floribunda", "Miconia_galactantha", "Miconia_hygrophila", "Miconia_longifolia", "Miconia_media", "Miconia_micropetala", "Miconia_minutiflora", "Miconia_modica", "Miconia_multispicata", "Miconia_myriantha", "Miconia_nervosa", "Miconia_phanerostila", "Miconia_platyphylla", "Miconia_prasina", "Miconia_pyrifolia", "Miconia_serrulata", "Miconia_spennerostachya", "Miconia_triplinervis", "Mollinedia_lanceolata", "Mollinedia_ovata", "Mollinedia_racemosa", "Mollinedia_repanda", "Monnina_connectisepala", "Monnina_densecomata", "Monnina_hirtella", "Monnina_marginata", "Morella_pubescens", "Moutabea_aculeata", "Mucuna_elliptica", "Mucuna_sloanei", "Muehlenbeckia_tamnifolia", "Myrcia_bracteata", "Myrcia_fallax", "Myrcia_splendens", "Myrsine_coriacea", "Myrsine_dependens", "Myrteola_nummularia", "Myrteola_phylicoides", "Naucleopsis_krukovii", "Nectandra_cuspidata", "Neea_floribunda", "Neea_laxa", "Neea_spruceana", "Notopleura_epiphytica", "Notopleura_polyphlebia", "Notopleura_triaxillaris", "Ocotea_amazonica", "Ocotea_oblonga", "Oreopanax_capitatus", "Oreopanax_microflorous", "Oreopanax_ruizii", "Orthaea_boliviensis", "Otoba_glycycarpa", "Palicourea_amethystina", "Palicourea_buchtienii", "Palicourea_conferta", "Palicourea_grandiflora", "Palicourea_herrerae", "Palicourea_lineata", "Palicourea_macbridei", "Palicourea_mansoana", "Palicourea_microcarpa", "Palicourea_stipularis", "Palicourea_subspicata", "Palicourea_virens", "Passiflora_auriculata", "Passovia_stelis", "Paullinia_alata", "Paullinia_elegans", "Peristethium_polystachyum", "Pernettya_prostrata", "Persea_buchtienii", "Persea_mutisii", "Phoradendron_chrysocladon", "Phoradendron_undulatum", "Phthirusa_pyrifolia", "Phytolacca_rivinoides", "Picramnia_sellowii", "Piper_arboreum", "Piper_augustum", "Piper_costatum", "Piper_crassinervium", "Piper_lanceaefolium", "Piper_machupicchuense", "Piper_obliquum", "Piper_pallididorsum", "Piper_positum", "Pleurothyrium_trianae", "Podocarpus_oleifolius", "Pourouma_bicolor", "Pourouma_cecropiifolia", "Pourouma_guianensis", "Pourouma_tomentosa", "Pouteria_torta", "Protium_guianense", "Protium_sagotianum", "Protium_spruceanum", "Prunus_huantensis", "Prunus_integrifolia", "Psammisia_coarctata", "Psychotria_brachiata", "Psychotria_buchtienii", "Psychotria_conephoroides", "Psychotria_herzogii", "Psychotria_hospitalis", "Psychotria_limitanea", "Psychotria_longicuspis", "Psychotria_lupulina", "Psychotria_microbotrys", "Psychotria_officinalis", "Psychotria_racemosa", "Psychotria_reticulata", "Psychotria_schunkei", "Psychotria_trichotoma", "Psychotria_viridis", "Quararibea_cordata", "Quararibea_wittii", "Quiina_amazonica", "Randia_ferox", "Rauvolfia_leptophylla", "Ribes_bolivianum", "Rollinia_chrysocarpa", "Ronabea_latifolia", "Roupala_monosperma", "Rubus_adenotrichos", "Rubus_floribundus", "Rubus_roseus", "Rudgea_loretensis", "Rudgea_poeppigii", "Rudgea_sessiliflora", "Rudgea_verticillata", "Ruyschia_pavonii", "Sabicea_panamensis", "Sapium_glandulosum", "Saracha_punctata", "Sarcopera_anomala", "Saurauia_peruviana", "Schefflera_acuminata", "Schefflera_kuntzei", "Schefflera_mathewsii", "Schefflera_patula", "Senefeldera_inclinata", "Senna_herzogii", "Senna_multijuga", "Siparuna_thecaphora", "Siparuna_tomentosa", "Siphonandra_elliptica", "Sloanea_fragrans", "Sloanea_gracilis", "Smilax_domingensis", "Solanum_actaeibotrys", "Solanum_acuminatum", "Solanum_amblophyllum", "Solanum_americanum", "Solanum_dimorphandrum", "Solanum_leucopogon", "Solanum_lindenii", "Solanum_nutans", "Solanum_obliquum", "Solanum_schlechtendalianum", "Solanum_scuticum", "Solanum_ternatum", "Souroubea_guianensis", "Souroubea_pachyphylla", "Spirotheca_rosea", "Stylogyne_serpentina", "Styrax_foveolaria", "Swartzia_myrtifolia", "Symplocos_arechea", "Symplocos_bogotensis", "Symplocos_fimbriata", "Symplocos_psiloclada", "Symplocos_quitensis", "Symplocos_reflexa", "Tabernaemontana_cymosa", "Tabernaemontana_sananho", "Tapirira_guianensis", "Ternstroemia_brachypoda", "Ternstroemia_penduliflora", "Theobroma_cacao", "Thibaudia_crenulata", 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